CSCN

Filter Gene

NMF

  • Module Contribution top 10 gene

WGCNA

  • kTotal
  • kWithin
  • Module Correlation
  • betweenness
  • eigen centrality

Compare Filter Method

Filter Gene lists VS CSN gene list

  1. Drop unconnected nodes
  2. Compare Similarity
    1. Top connected edge
    2. Top degree